STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mto1Mitochondrial tRNA translation optimization 1. (675 aa)    
Predicted Functional Partners:
Gtpbp3
GTP binding protein 3, mitochondrial.
 
 0.996
Trmu
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.949
Cars2
cysteinyl-tRNA synthetase 2, mitochondrial.
  
  
 0.842
Vps45
Vacuolar protein sorting 45 homolog.
 
      0.765
Dao
D-amino acid oxidase.
     
 0.693
Supt7l
SPT7 like, STAGA complex gamma subunit.
   
  
 0.693
Acod1
Aconitate decarboxylase 1.
     
 0.693
Ddo
D-aspartate oxidase.
     
 0.693
Pipox
Pipecolic acid and sarcosine oxidase.
     
 0.693
Mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
  
 0.647
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.