STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101998801Gamma-crystallin E. (174 aa)    
Predicted Functional Partners:
Gh
Growth hormone.
   
    0.792
Amelx
Amelogenin X-linked.
   
    0.754
Bpifa2
BPI fold containing family A member 2.
   
    0.647
Prph2
Peripherin 2.
   
  
 0.587
Cryab
Crystallin alpha B.
    
 
 0.531
Cryaa
Crystallin alpha A.
   
 
 0.486
LOC102002288
Chymotrypsin-like elastase family member 3B.
   
    0.470
Lim2
Lens intrinsic membrane protein 2.
  
  
 0.444
ENSMOCP00000014937
annotation not available
   
    0.443
Chad
Chondroadherin.
   
    0.440
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.