STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3hcc1R3H domain and coiled-coil containing 1. (484 aa)    
Predicted Functional Partners:
Svopl
SVOP like.
      
 0.545
Snrpn
Small nuclear ribonucleoprotein polypeptide N.
     
 0.469
Tmem63c
Transmembrane protein 63C.
      
 0.433
Mocs1
Molybdenum cofactor synthesis 1.
      
 0.432
Papln
Papilin, proteoglycan like sulfated glycoprotein.
      
 0.431
Chmp7
Charged multivesicular body protein 7.
      
 0.428
Pgm2
Phosphoglucomutase 2.
      
 0.418
Sord
Sorbitol dehydrogenase.
      
 0.408
Yipf3
Yip1 domain family member 3.
      
 0.400
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.