STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rb1cc1RB1 inducible coiled-coil 1. (164 aa)    
Predicted Functional Partners:
Atg14
Autophagy related 14.
   
 0.990
Ulk1
Unc-51 like autophagy activating kinase 1.
    
 0.990
Nrbf2
Nuclear receptor binding factor 2.
    
 0.987
Atg13
Autophagy related 13.
    
 0.986
Ulk2
Unc-51 like autophagy activating kinase 2.
    
 0.985
Atg101
Autophagy related 101.
    
 0.980
Atg16l1
Autophagy related 16 like 1.
   
 0.977
Becn1
Beclin 1.
    
 0.972
Gm38100
Beclin-2-like.
    
 0.964
Atg16l2
Autophagy related 16 like 2.
   
 0.952
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.