STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbr1Debranching RNA lariats 1. (536 aa)    
Predicted Functional Partners:
Dhx38
DEAH-box helicase 38.
    
 
 0.933
Gpatch11
G patch domain containing 11.
   
 
 0.754
Cwf19l1
CWF19 like cell cycle control factor 1.
   
 
0.754
Dhx15
DEAH-box helicase 15.
    
 
 0.637
Xpo5
Exportin 5.
   
  
 0.630
Dhx32
DEAH-box helicase 32 (putative).
    
 
 0.615
Dqx1
DEAQ-box RNA dependent ATPase 1.
    
 
 0.615
Prpf18
pre-mRNA processing factor 18.
    
 
 0.613
Drosha
Drosha ribonuclease III.
      
 0.559
Cwf19l2
CWF19 like cell cycle control factor 2.
   
  
 0.556
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.