STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc12Tetratricopeptide repeat domain 12. (704 aa)    
Predicted Functional Partners:
Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.945
Wdhd1
WD repeat and HMG-box DNA binding protein 1.
    
 
 0.902
ENSMOCP00000000121
annotation not available
  
 0.897
Tsc1
TSC complex subunit 1.
  
 0.897
ENSMOCP00000004794
annotation not available
  
 0.897
ENSMOCP00000005203
annotation not available
  
 0.897
Trap1
TNF receptor associated protein 1.
  
 0.897
Hsp90ab1
Heat shock protein 90 alpha family class B member 1.
  
 0.897
ENSMOCP00000022223
annotation not available
  
 0.897
ENSMOCP00000023531
annotation not available
  
 0.897
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.