STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NsfN-ethylmaleimide sensitive factor, vesicle fusing ATPase. (744 aa)    
Predicted Functional Partners:
Scfd1
Sec1 family domain containing 1.
   
 0.996
Napa
NSF attachment protein alpha.
   
 0.989
Napb
NSF attachment protein beta.
   
 0.985
Napg
NSF attachment protein gamma.
   
 0.985
Ubxn7
UBX domain protein 7.
   
 0.983
Ykt6
YKT6 v-SNARE homolog.
    
 0.977
Stx1a
Syntaxin 1A.
   
 0.972
Stx5a
Syntaxin 5.
    
 0.964
Copb2
Coatomer protein complex subunit beta 2.
   
 0.961
Snap25
Synaptosome associated protein 25.
   
 
 0.959
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.