STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxc6Homeobox C6. (235 aa)    
Predicted Functional Partners:
Hoxc9
Homeobox C9.
   
 
0.980
Hoxc5
Homeobox C5.
   
  
0.963
Hoxc4
Homeobox C4.
   
 
0.963
Hoxb7
Homeobox B7.
   
 
0.918
Hoxa7
Homeobox A7.
   
  
0.888
Hoxb6
Homeobox B6.
   
  
0.885
Hoxb5
Homeobox B5.
   
  
0.839
Hoxd4
Homeobox D4.
   
 
0.832
Hoxb4
Homeobox B4.
   
 
0.814
Hoxa6
Homeobox A6.
   
  
0.811
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.