STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stk40Serine/threonine kinase 40. (435 aa)    
Predicted Functional Partners:
Cop1
COP1, E3 ubiquitin ligase.
    
 
 0.894
Trib1
Tribbles pseudokinase 1.
    
 
0.887
Trib3
Tribbles pseudokinase 3.
    
 
0.860
Etv1
ETS variant transcription factor 1.
    
   0.852
Etv5
ETS variant transcription factor 5.
    
   0.849
Prkab1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.806
Prkab2
Protein kinase AMP-activated non-catalytic subunit beta 2.
    
 0.806
Dnajb4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.787
Yars
tyrosyl-tRNA synthetase 1.
      
 0.785
Soat1
Sterol O-acyltransferase 1.
      
 0.781
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.