STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000021802annotation not available (109 aa)    
Predicted Functional Partners:
Traf6
TNF receptor associated factor 6.
    
 0.989
Map1lc3b
Microtubule associated protein 1 light chain 3 beta.
   
 0.981
Map1lc3a
Microtubule associated protein 1 light chain 3 alpha.
   
 0.981
Keap1
Kelch like ECH associated protein 1.
    
 0.980
ENSMOCP00000026100
annotation not available
    
 0.977
Prkcz
Protein kinase C zeta.
    
 0.976
LOC101978981
Ubiquitin-like.
   
 0.975
Prkci
Protein kinase C iota.
    
 0.955
Plekhn1
Kelch like family member 17.
    
 0.948
Tbk1
TANK-binding kinase 1.
    
 0.939
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.