STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SfpqSplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated). (468 aa)    
Predicted Functional Partners:
Ptk6
Protein tyrosine kinase 6.
    
  0.559
Ptbp1
Polypyrimidine tract binding protein 1.
   
 
 0.530
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.522
Srms
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites.
    
  0.517
Fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
  0.517
Fgr
FGR proto-oncogene, Src family tyrosine kinase.
    
  0.513
Ptbp2
Polypyrimidine tract binding protein 2.
   
 
 0.503
Sin3a
SIN3 transcription regulator family member A.
    
 
 0.476
Snrpa
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.474
Src
SRC proto-oncogene, non-receptor tyrosine kinase.
    
  0.470
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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