Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ep300 | Gata4 | ENSMOCP00000013970 | ENSMOCP00000022010 | E1A binding protein p300. | GATA binding protein 4. | 0.880 |
Ep300 | Nfatc1 | ENSMOCP00000013970 | ENSMOCP00000019424 | E1A binding protein p300. | Nuclear factor of activated T cells 1. | 0.527 |
Ep300 | Nfatc2 | ENSMOCP00000013970 | ENSMOCP00000000308 | E1A binding protein p300. | Nuclear factor of activated T cells 2. | 0.414 |
Ep300 | Srf | ENSMOCP00000013970 | ENSMOCP00000020271 | E1A binding protein p300. | Serum response factor. | 0.424 |
Ep300 | Zfpm1 | ENSMOCP00000013970 | ENSMOCP00000002173 | E1A binding protein p300. | Zinc finger protein, FOG family member 1. | 0.704 |
Ep300 | Zfpm2 | ENSMOCP00000013970 | ENSMOCP00000014156 | E1A binding protein p300. | Zinc finger protein, FOG family member 2. | 0.423 |
Gata4 | Ep300 | ENSMOCP00000022010 | ENSMOCP00000013970 | GATA binding protein 4. | E1A binding protein p300. | 0.880 |
Gata4 | Lmo2 | ENSMOCP00000022010 | ENSMOCP00000004305 | GATA binding protein 4. | LIM domain only 2. | 0.869 |
Gata4 | Nfatc1 | ENSMOCP00000022010 | ENSMOCP00000019424 | GATA binding protein 4. | Nuclear factor of activated T cells 1. | 0.876 |
Gata4 | Nfatc2 | ENSMOCP00000022010 | ENSMOCP00000000308 | GATA binding protein 4. | Nuclear factor of activated T cells 2. | 0.879 |
Gata4 | Nfatc3 | ENSMOCP00000022010 | ENSMOCP00000008788 | GATA binding protein 4. | Nuclear factor of activated T cells 3. | 0.870 |
Gata4 | Nfatc4 | ENSMOCP00000022010 | ENSMOCP00000015130 | GATA binding protein 4. | Nuclear factor of activated T cells 4. | 0.907 |
Gata4 | Nkx2-5 | ENSMOCP00000022010 | ENSMOCP00000021384 | GATA binding protein 4. | NK2 homeobox 5. | 0.976 |
Gata4 | Srf | ENSMOCP00000022010 | ENSMOCP00000020271 | GATA binding protein 4. | Serum response factor. | 0.952 |
Gata4 | Zfpm1 | ENSMOCP00000022010 | ENSMOCP00000002173 | GATA binding protein 4. | Zinc finger protein, FOG family member 1. | 0.870 |
Gata4 | Zfpm2 | ENSMOCP00000022010 | ENSMOCP00000014156 | GATA binding protein 4. | Zinc finger protein, FOG family member 2. | 0.940 |
Lmo2 | Gata4 | ENSMOCP00000004305 | ENSMOCP00000022010 | LIM domain only 2. | GATA binding protein 4. | 0.869 |
Lmo2 | Srf | ENSMOCP00000004305 | ENSMOCP00000020271 | LIM domain only 2. | Serum response factor. | 0.694 |
Lmo2 | Zfpm1 | ENSMOCP00000004305 | ENSMOCP00000002173 | LIM domain only 2. | Zinc finger protein, FOG family member 1. | 0.657 |
Nfatc1 | Ep300 | ENSMOCP00000019424 | ENSMOCP00000013970 | Nuclear factor of activated T cells 1. | E1A binding protein p300. | 0.527 |
page 1 of 3