STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Itgb1Integrin subunit beta 1. (798 aa)    
Predicted Functional Partners:
Itga6
Integrin subunit alpha 6.
   
 0.996
Itga5
Integrin subunit alpha 5.
   
 0.996
Tln1
Talin 1.
   
 0.989
Flna
Filamin A.
    
 0.988
Lamc1
Laminin subunit gamma 1.
   
 0.988
Itgav
Integrin subunit alpha V.
   
 0.979
Itga4
Integrin subunit alpha 4.
   
 0.979
Itga2
Integrin subunit alpha 2.
   
 0.978
Lama5
Laminin subunit alpha 5.
    
 0.977
Itga9
Integrin alpha 9.
   
 0.974
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.