STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SnphSyntaphilin. (491 aa)    
Predicted Functional Partners:
Rad21l
RAD21 cohesin complex component like 1.
 
   
  0.682
Rad21
RAD21 cohesin complex component.
 
   
  0.663
Tmem82
Transmembrane protein 82.
      
 0.543
Sybu
Syntabulin.
    
 
0.458
Spata3
Spermatogenesis associated 3.
      
 0.443
Cplx4
Complexin 4.
      
 0.432
Ntan1
N-terminal asparagine amidase.
      
 0.431
ENSMOCP00000006133
annotation not available
      
 0.429
Sh3gl1
SH3 domain containing GRB2 like 1, endophilin A2.
      
 0.429
Trak1
Trafficking kinesin protein 1.
      
 0.428
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.