STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Crim1Cysteine rich transmembrane BMP regulator 1. (1037 aa)    
Predicted Functional Partners:
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.930
Gp1ba
Glycoprotein Ib platelet subunit alpha.
    
 0.865
Frem1
FRAS1 related extracellular matrix 1.
    
 0.812
Fras1
Fraser extracellular matrix complex subunit 1.
    
0.797
Gle1
GLE1 RNA export mediator.
    
 0.774
Nup214
Nucleoporin 214.
    
 0.720
Aaas
Aladin WD repeat nucleoporin.
    
 0.717
Asf1a
Anti-silencing function 1A histone chaperone.
    
 0.710
Asf1b
Anti-silencing function 1B histone chaperone.
    
 0.710
Gp1bb
Glycoprotein Ib platelet subunit beta.
   
 0.697
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.