STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmp23Matrix metallopeptidase 23B. (392 aa)    
Predicted Functional Partners:
Pla2g4a
Phospholipase A2 group IVA.
     
 0.760
Timp2
TIMP metallopeptidase inhibitor 2.
   
 0.746
Timp3
TIMP metallopeptidase inhibitor 3.
   
 0.723
Timp4
TIMP metallopeptidase inhibitor 4.
    
 0.721
ENSMOCP00000002037
annotation not available
     
 0.571
Furin
Furin, paired basic amino acid cleaving enzyme.
    
 0.546
Hgfac
HGF activator.
    
 0.537
Col22a1
Collagen, type XXII, alpha 1.
    
 0.536
F12
Coagulation factor XII.
    
 0.535
Habp2
Hyaluronan binding protein 2.
    
 0.535
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.