STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IqubIQ motif and ubiquitin domain containing. (772 aa)    
Predicted Functional Partners:
Ankrd42
Ankyrin repeat domain 42.
  
 
 0.827
Armc3
Armadillo repeat containing 3.
   
 
 0.784
Efcab1
EF-hand calcium binding domain 1.
   
 0.719
Traf7
TNF receptor associated factor 7.
   
 0.718
Bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.716
Ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.714
Armc4
Armadillo repeat containing 4.
   
 
 0.712
Tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.705
Tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.705
Dnali1
Dynein axonemal light intermediate chain 1.
   
 
 0.702
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.