STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hivep1HIVEP zinc finger 1. (2677 aa)    
Predicted Functional Partners:
Ak9
Adenylate kinase 9.
    
  0.858
Btrc
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
  0.718
Arid4b
AT-rich interaction domain 4B.
    
 0.633
Rora
RAR related orphan receptor A.
    
 
 0.601
Wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.590
Itch
Itchy E3 ubiquitin protein ligase.
    
 0.590
Sufu
SUFU negative regulator of hedgehog signaling.
    
 0.590
Wwp2
WW domain containing E3 ubiquitin protein ligase 2.
    
 0.590
Gtf3c3
General transcription factor IIIC subunit 3.
    
 0.587
Lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.575
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.