STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scara5Scavenger receptor class A member 5. (492 aa)    
Predicted Functional Partners:
Ptk7
Protein tyrosine kinase 7 (inactive).
    
 0.717
Cd47
CD47 molecule.
   
 0.709
C1s
Complement C1s.
    
 0.644
LOC102001807
Low affinity immunoglobulin gamma Fc region receptor II-like.
   
 0.639
Cd5
CD5 molecule.
   
 
 0.631
Sftpd
Surfactant protein D.
  
 
0.629
Rnasel
Ribonuclease L.
   
 0.620
Col22a1
Collagen, type XXII, alpha 1.
    
0.609
Ftl
Ferritin light chain.
     
 0.604
Mbl1
Mannose-binding protein A-like.
    
 0.598
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.