STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SdslSerine dehydratase like. (329 aa)    
Predicted Functional Partners:
Bcat1
Branched chain amino acid transaminase 1.
  
 
 0.943
Bcat2
Branched chain amino acid transaminase 2.
  
 
 0.943
Rida
Reactive intermediate imine deaminase A homolog.
  
 0.928
Agxt
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.925
Cth
Cystathionine gamma-lyase.
  
 
 0.920
Tha1
Probable low-specificity L-threonine aldolase 2.
  
 
 0.915
Thnsl1
Threonine synthase like 1.
  
 
 0.908
Thnsl2
Threonine synthase like 2.
  
 
 0.908
Cbs
Cystathionine beta-synthase.
  
 
 0.907
Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 0.903
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.