STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hdac10Histone deacetylase 10. (673 aa)    
Predicted Functional Partners:
Arid4b
AT-rich interaction domain 4B.
    
 0.949
Arid4a
AT-rich interaction domain 4A.
    
 0.949
Macroh2a1
Core histone macro-H2A.1.
   
 0.908
Macroh2a2
Core histone macro-H2A.2.
   
 0.908
LOC101986063
Histone H2B type 1-H.
    
 0.905
ENSMOCP00000002600
annotation not available
    
 0.905
H2bc18
Histone H2B type 2-F.
    
 0.905
H2bc3
Histone H2B type 1-B-like.
    
 0.898
H2bu2
Histone H2B type 3-A.
    
 0.898
H2bc1
Histone H2B type 1-A.
    
 0.898
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.