STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BbxBBX high mobility group box domain containing. (938 aa)    
Predicted Functional Partners:
Atxn1
Ataxin 1.
    
 
 0.733
Atxn1l
Ataxin 1 like.
    
 
 0.733
Itih4
Inter-alpha-trypsin inhibitor heavy chain 4.
    
 0.628
Sin3b
SIN3 transcription regulator family member B.
   
 
 0.627
Sin3a
SIN3 transcription regulator family member A.
   
 
 0.627
Itih2
Inter-alpha-trypsin inhibitor heavy chain 2.
    
 0.611
Itih1
Inter-alpha-trypsin inhibitor heavy chain 1.
    
 0.602
Phip
Pleckstrin homology domain interacting protein.
   
    0.585
Rc3h2
Ring finger and CCCH-type domains 2.
   
    0.579
Lrrk2
Leucine rich repeat kinase 2.
   
 0.572
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.