STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdk1Pyruvate dehydrogenase kinase 1. (432 aa)    
Predicted Functional Partners:
Pdha1
Pyruvate dehydrogenase E1 alpha 1 subunit.
   
 0.966
Pdhb
Pyruvate dehydrogenase E1 beta subunit.
   
 0.958
Dlat
Dihydrolipoamide S-acetyltransferase.
   
 0.940
Map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.916
Pdk2
Pyruvate dehydrogenase kinase 2.
  
 
 
0.904
Pdhx
Pyruvate dehydrogenase complex component X.
   
 0.877
Tnr
Tenascin R.
     
 0.829
Tnc
Tenascin C.
     
 0.829
Tnxb
Tenascin XB.
     
 0.829
Tnn
Tenascin N.
     
 0.829
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.