STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem211Transmembrane protein 211. (197 aa)    
Predicted Functional Partners:
Pcdhb1
Protocadherin beta 1.
    
 0.575
Aplp1
Amyloid beta (A4) precursor-like protein 1.
     
 0.534
Cib3
Calcium and integrin binding family member 3.
     
 0.533
Tmie
Transmembrane inner ear.
     
 0.533
Cib2
Calcium and integrin binding family member 2.
     
 0.533
App
Amyloid beta precursor protein.
     
 0.483
Aplp2
Amyloid beta precursor like protein 2.
     
 0.483
Phactr3
Phosphatase and actin regulator 3.
     
 0.471
Ccdc115
Coiled-coil domain containing 115.
      
 0.437
Gramd1c
GRAM domain containing 1C.
      
 0.437
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.