STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gmeb2Glucocorticoid modulatory element binding protein 2. (530 aa)    
Predicted Functional Partners:
Gmeb1
Glucocorticoid modulatory element binding protein 1.
    
 
0.863
Brpf1
Bromodomain and PHD finger containing 1.
   
    0.774
Nelfb
Negative elongation factor complex member B.
   
  
 0.591
Fzr1
Fizzy and cell division cycle 20 related 1.
   
   0.552
Tysnd1
Trypsin domain containing 1.
      
 0.541
Ell
Elongation factor for RNA polymerase II.
   
  
 0.503
Zgpat
Zinc finger CCCH-type and G-patch domain containing.
   
  
 0.500
Zfp341
Zinc finger protein 341.
    
 
 0.488
Sdc1
Syndecan 1.
    
   0.477
Cask
Calcium/calmodulin dependent serine protein kinase.
    
   0.451
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.