STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp454Zinc finger protein 454. (516 aa)    
Predicted Functional Partners:
Ak9
Adenylate kinase 9.
    
  0.858
Sufu
SUFU negative regulator of hedgehog signaling.
   
 0.603
Trim28
Tripartite motif containing 28.
    
 0.593
Gtf3c3
General transcription factor IIIC subunit 3.
    
 0.587
Lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.575
Ak1
Adenylate kinase 1.
   
 
 0.567
Chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.560
Mrps10
Mitochondrial ribosomal protein S10.
   
  0.559
Mrps11
Mitochondrial ribosomal protein S11.
    
  0.557
Mrps15
Mitochondrial ribosomal protein S15.
   
  0.553
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.