STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xirp1Xin actin binding repeat containing 1. (1122 aa)    
Predicted Functional Partners:
Wdr18
WD repeat domain 18.
   
 0.881
Csrp3
Cysteine and glycine rich protein 3.
   
 
 0.836
Tex10
Testis expressed 10.
   
 0.836
Pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.823
Myl1
Myosin light chain 1.
   
 0.822
Actn2
Actinin alpha 2.
   
 0.794
Actn3
Actinin alpha 3.
   
 0.777
Bop1
BOP1 ribosomal biogenesis factor.
   
 0.760
Actn4
Actinin alpha 4.
   
 0.734
Actn1
Actinin alpha 1.
   
 0.734
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.