STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit. (413 aa)    
Predicted Functional Partners:
Prorp
Protein only RNase P catalytic subunit.
   
 0.988
Hsd17b10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.981
ENSMOCP00000007322
annotation not available
    
 0.981
Rpf1
Ribosome production factor 1 homolog.
   
  
 0.923
Mettl1
Methyltransferase like 1.
   
 
 0.795
Slc47a1
Multidrug and toxin extrusion protein 1.
   
 0.782
Slc47a2
Multidrug and toxin extrusion protein 2.
   
 0.782
Mrps31
Mitochondrial ribosomal protein S31.
   
 
 0.729
Wdr4
WD repeat domain 4.
   
 
 0.728
Trmt6
tRNA methyltransferase 6.
   
  
 0.712
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.