STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (472 aa)    
Predicted Functional Partners:
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.835
Hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.800
Hnrnpa2b1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.798
ENSMOCP00000025003
annotation not available
   
 0.798
Hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.791
Ncbp2
Nuclear cap binding protein subunit 2.
   
 0.791
Hnrnpul1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.785
Srsf1
Serine and arginine rich splicing factor 1.
   
 0.781
Ncbp1
Nuclear cap binding protein subunit 1.
   
 0.778
Syncrip
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.757
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.