STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cib4Calcium and integrin binding family member 4. (189 aa)    
Predicted Functional Partners:
Cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.877
Ppp3cb
Protein phosphatase 3 catalytic subunit beta.
    
 0.862
Ppp3ca
Protein phosphatase 3 catalytic subunit alpha.
    
 0.862
Ppp3cc
Protein phosphatase 3 catalytic subunit gamma.
    
 0.862
Tssk4
Testis specific serine kinase 4.
    
 0.794
Lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 0.780
ENSMOCP00000002282
annotation not available
    
 0.769
Myo3b
Myosin IIIB.
    
 0.769
ENSMOCP00000019013
annotation not available
    
 0.769
Fkbp3
FKBP prolyl isomerase 3.
   
 0.735
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.