STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krtap3-1Keratin-associated protein 3-1. (98 aa)    
Predicted Functional Partners:
Krtap11-1
Keratin-associated protein 11-1.
   
 0.928
LOC101994743
Keratin-associated protein 3-2.
  
 
 
0.879
LOC101994455
Keratin-associated protein 3-2.
  
 
 
0.879
Ruvbl1
RuvB like AAA ATPase 1.
    
 0.822
Gm11563
Keratin-associated protein 4-11-like.
   
 
 0.817
Actr5
Actin related protein 5.
    
 0.800
Krtap8-1
Keratin-associated protein 8-1.
  
 
 0.775
Krtap7-1
Keratin-associated protein 7-1.
  
 
 0.751
Ino80c
INO80 complex subunit C.
    
 0.742
Ruvbl2
RuvB like AAA ATPase 2.
    
 
 0.680
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.