STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdlim3PDZ and LIM domain 3. (364 aa)    
Predicted Functional Partners:
Ptk2b
Protein tyrosine kinase 2 beta.
    
 0.827
Ptk2
Protein tyrosine kinase 2.
    
 0.827
Git1
GIT ArfGAP 1.
    
 0.790
Git2
GIT ArfGAP 2.
    
 0.790
Ilk
Integrin linked kinase.
   
 0.771
Actn2
Actinin alpha 2.
   
 
 0.762
Tpm2
Tropomyosin 2.
   
 0.749
Vcl
Vinculin.
   
 0.743
Parva
Parvin alpha.
   
 0.738
Parvg
Parvin gamma.
   
 0.738
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.