Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aire | Egr2 | ENSMOCP00000008193 | ENSMOCP00000009010 | Autoimmune regulator. | Early growth response 2. | 0.714 |
Aire | Nab2 | ENSMOCP00000008193 | ENSMOCP00000024212 | Autoimmune regulator. | NGFI-A binding protein 2. | 0.753 |
Chd3 | Chd4 | ENSMOCP00000005425 | ENSMOCP00000024127 | Chromodomain helicase DNA binding protein 3. | Chromodomain helicase DNA binding protein 4. | 0.961 |
Chd3 | Egr1 | ENSMOCP00000005425 | ENSMOCP00000011464 | Chromodomain helicase DNA binding protein 3. | Early growth response 1. | 0.632 |
Chd3 | Egr2 | ENSMOCP00000005425 | ENSMOCP00000009010 | Chromodomain helicase DNA binding protein 3. | Early growth response 2. | 0.728 |
Chd3 | Egr3 | ENSMOCP00000005425 | ENSMOCP00000015587 | Chromodomain helicase DNA binding protein 3. | Early growth response 3. | 0.632 |
Chd3 | Egr4 | ENSMOCP00000005425 | ENSMOCP00000003696 | Chromodomain helicase DNA binding protein 3. | Early growth response 4. | 0.423 |
Chd3 | Nab2 | ENSMOCP00000005425 | ENSMOCP00000024212 | Chromodomain helicase DNA binding protein 3. | NGFI-A binding protein 2. | 0.823 |
Chd4 | Chd3 | ENSMOCP00000024127 | ENSMOCP00000005425 | Chromodomain helicase DNA binding protein 4. | Chromodomain helicase DNA binding protein 3. | 0.961 |
Chd4 | Chd5 | ENSMOCP00000024127 | ENSMOCP00000010850 | Chromodomain helicase DNA binding protein 4. | Chromodomain helicase DNA binding protein 5. | 0.542 |
Chd4 | Egr1 | ENSMOCP00000024127 | ENSMOCP00000011464 | Chromodomain helicase DNA binding protein 4. | Early growth response 1. | 0.634 |
Chd4 | Egr2 | ENSMOCP00000024127 | ENSMOCP00000009010 | Chromodomain helicase DNA binding protein 4. | Early growth response 2. | 0.780 |
Chd4 | Egr3 | ENSMOCP00000024127 | ENSMOCP00000015587 | Chromodomain helicase DNA binding protein 4. | Early growth response 3. | 0.632 |
Chd4 | Egr4 | ENSMOCP00000024127 | ENSMOCP00000003696 | Chromodomain helicase DNA binding protein 4. | Early growth response 4. | 0.423 |
Chd4 | Nab2 | ENSMOCP00000024127 | ENSMOCP00000024212 | Chromodomain helicase DNA binding protein 4. | NGFI-A binding protein 2. | 0.875 |
Chd5 | Chd4 | ENSMOCP00000010850 | ENSMOCP00000024127 | Chromodomain helicase DNA binding protein 5. | Chromodomain helicase DNA binding protein 4. | 0.542 |
Chd5 | Egr1 | ENSMOCP00000010850 | ENSMOCP00000011464 | Chromodomain helicase DNA binding protein 5. | Early growth response 1. | 0.632 |
Chd5 | Egr2 | ENSMOCP00000010850 | ENSMOCP00000009010 | Chromodomain helicase DNA binding protein 5. | Early growth response 2. | 0.728 |
Chd5 | Egr3 | ENSMOCP00000010850 | ENSMOCP00000015587 | Chromodomain helicase DNA binding protein 5. | Early growth response 3. | 0.632 |
Chd5 | Egr4 | ENSMOCP00000010850 | ENSMOCP00000003696 | Chromodomain helicase DNA binding protein 5. | Early growth response 4. | 0.438 |
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