Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSMOCP00000018082 | Prss48 | ENSMOCP00000018082 | ENSMOCP00000024229 | annotation not available | Serine protease 48. | 0.566 |
ENSMOCP00000024879 | Prss48 | ENSMOCP00000024879 | ENSMOCP00000024229 | annotation not available | Serine protease 48. | 0.566 |
F3 | Prss48 | ENSMOCP00000022764 | ENSMOCP00000024229 | Coagulation factor III, tissue factor. | Serine protease 48. | 0.553 |
Met | Mst1r | ENSMOCP00000006670 | ENSMOCP00000007460 | MET proto-oncogene, receptor tyrosine kinase. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.903 |
Met | Prss48 | ENSMOCP00000006670 | ENSMOCP00000024229 | MET proto-oncogene, receptor tyrosine kinase. | Serine protease 48. | 0.784 |
Met | Ptk7 | ENSMOCP00000006670 | ENSMOCP00000007125 | MET proto-oncogene, receptor tyrosine kinase. | Protein tyrosine kinase 7 (inactive). | 0.956 |
Met | Sned1 | ENSMOCP00000006670 | ENSMOCP00000003289 | MET proto-oncogene, receptor tyrosine kinase. | Sushi, nidogen and EGF like domains 1. | 0.601 |
Met | Wdr90 | ENSMOCP00000006670 | ENSMOCP00000006955 | MET proto-oncogene, receptor tyrosine kinase. | WD repeat domain 90. | 0.522 |
Mst1r | Met | ENSMOCP00000007460 | ENSMOCP00000006670 | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | MET proto-oncogene, receptor tyrosine kinase. | 0.903 |
Mst1r | Prss48 | ENSMOCP00000007460 | ENSMOCP00000024229 | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | Serine protease 48. | 0.784 |
Mst1r | Ptk7 | ENSMOCP00000007460 | ENSMOCP00000007125 | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | Protein tyrosine kinase 7 (inactive). | 0.956 |
Mst1r | Sned1 | ENSMOCP00000007460 | ENSMOCP00000003289 | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | Sushi, nidogen and EGF like domains 1. | 0.601 |
Mst1r | Wdr90 | ENSMOCP00000007460 | ENSMOCP00000006955 | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | WD repeat domain 90. | 0.522 |
Ndufab1 | Prss48 | ENSMOCP00000025048 | ENSMOCP00000024229 | NADH:ubiquinone oxidoreductase subunit AB1. | Serine protease 48. | 0.566 |
Prss48 | ENSMOCP00000018082 | ENSMOCP00000024229 | ENSMOCP00000018082 | Serine protease 48. | annotation not available | 0.566 |
Prss48 | ENSMOCP00000024879 | ENSMOCP00000024229 | ENSMOCP00000024879 | Serine protease 48. | annotation not available | 0.566 |
Prss48 | F3 | ENSMOCP00000024229 | ENSMOCP00000022764 | Serine protease 48. | Coagulation factor III, tissue factor. | 0.553 |
Prss48 | Met | ENSMOCP00000024229 | ENSMOCP00000006670 | Serine protease 48. | MET proto-oncogene, receptor tyrosine kinase. | 0.784 |
Prss48 | Mst1r | ENSMOCP00000024229 | ENSMOCP00000007460 | Serine protease 48. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.784 |
Prss48 | Ndufab1 | ENSMOCP00000024229 | ENSMOCP00000025048 | Serine protease 48. | NADH:ubiquinone oxidoreductase subunit AB1. | 0.566 |
page 1 of 2