STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Frmd5FERM domain containing 5. (570 aa)    
Predicted Functional Partners:
Cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.781
Camk2b
Calcium/calmodulin dependent protein kinase II beta.
   
 0.569
Camk2a
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.569
Camk2d
Calcium/calmodulin dependent protein kinase II delta.
   
 0.569
Fbxo10
F-box protein 10.
      
 0.541
Lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
  0.538
Epb41l5
Erythrocyte membrane protein band 4.1 like 5.
     
0.503
Epb41l4a
Erythrocyte membrane protein band 4.1 like 4A.
     
0.503
Epb41l4b
Erythrocyte membrane protein band 4.1 like 4B.
     
0.503
Spta1
Spectrin alpha, erythrocytic 1.
   
 0.480
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.