STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GzmbGranzyme B-like. (247 aa)    
Predicted Functional Partners:
Casp3
Caspase 3.
    
 0.931
Tuba4a
Tubulin alpha 4a.
    
  0.884
Tubal3
Tubulin alpha like 3.
    
  0.884
Tuba3b
Tubulin, alpha 3B.
    
  0.884
Tuba8
Tubulin alpha 8.
    
  0.884
Bid
BH3 interacting domain death agonist.
    
 0.882
Parp1
poly(ADP-ribose) polymerase 1.
   
 0.881
Casp8
Caspase 8.
    
 0.877
Casp7
Caspase 7.
    
 0.873
Lmna
Lamin A/C.
    
 0.861
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.