STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdss1Decaprenyl diphosphate synthase subunit 1. (408 aa)    
Predicted Functional Partners:
Coq2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.945
LOC101980803
Squalene synthase.
  
 0.944
ENSMOCP00000027503
annotation not available
  
 0.944
Mvd
Mevalonate diphosphate decarboxylase.
  
 0.937
Fdps
Farnesyl diphosphate synthase.
    
 0.930
Fntb
Churchill domain containing 1.
   
 0.929
Dhdds
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.917
Pdss2
Decaprenyl diphosphate synthase subunit 2.
  
  
0.911
Ggps1
Geranylgeranyl diphosphate synthase 1.
     
 0.911
Idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.907
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.