STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trmt5tRNA methyltransferase 5. (505 aa)    
Predicted Functional Partners:
ENSMOCP00000001962
annotation not available
   
 
 0.933
Trmt112
tRNA methyltransferase subunit 11-2.
   
 
 0.933
Rfk
Riboflavin kinase.
     
 0.874
Tyw3
tRNA-yW synthesizing protein 3 homolog.
  
 
 0.841
Tyw1
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase.
  
 
 0.807
Sf3b3
Splicing factor 3b subunit 3.
   
 
  0.761
Mettl1
Methyltransferase like 1.
   
  
 0.731
Trmt61a
tRNA methyltransferase 61A.
   
  
 0.697
Dus2
Dihydrouridine synthase 2.
   
  
 0.675
Trmt11
tRNA methyltransferase 11 homolog.
   
  
 0.674
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.