STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scyl3SCY1 like pseudokinase 3. (732 aa)    
Predicted Functional Partners:
Arcn1
Archain 1.
    
 
 0.835
Xpot
Exportin for tRNA.
    
 
 0.644
Copa
Coatomer protein complex subunit alpha.
    
 
 0.584
Ezr
Ezrin.
    
 
 0.560
Bcdin3d
BCDIN3 domain containing RNA methyltransferase.
   
    0.524
Cope
Coatomer protein complex subunit epsilon.
   
 
 0.515
Nup98
Nucleoporin 98.
    
 
 0.503
Copb1
Coatomer protein complex subunit beta 1.
    
 
 0.477
Copb2
Coatomer protein complex subunit beta 2.
    
 
 0.473
Adgrd1
Adhesion G protein-coupled receptor D1.
    
 
 0.470
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.