STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc39a8Solute carrier family 39 member 8. (462 aa)    
Predicted Functional Partners:
Slc30a7
Solute carrier family 30 member 7.
   
 0.568
Sod2
Superoxide dismutase 2.
  
  
 0.543
Slc30a10
Solute carrier family 30 member 10.
   
 0.539
Sdr39u1
Short chain dehydrogenase/reductase family 39U member 1.
  
    0.521
Slc30a4
Solute carrier family 30 member 4.
   
 0.497
ENSMOCP00000007428
annotation not available
   
 0.493
Slc30a6
Solute carrier family 30 member 6.
   
 0.490
Slc39a9
Solute carrier family 39 member 9.
    
 
 0.481
Slc30a5
Solute carrier family 30 member 5.
   
 0.452
S100z
S100 calcium binding protein Z.
     
 0.446
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.