STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BroxBRO1 domain and CAAX motif containing. (411 aa)    
Predicted Functional Partners:
Chmp4b
Charged multivesicular body protein 4B.
   
 0.970
Tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.958
Chmp5
Charged multivesicular body protein 5.
    
 0.950
Chmp4c
Charged multivesicular body protein 4C.
   
 0.940
LOC102002737
Magnesium-dependent phosphatase 1.
    
 0.913
Mvb12b
Multivesicular body subunit 12B.
     
 0.751
Mvb12a
Multivesicular body subunit 12A.
     
 0.750
Chmp6
Charged multivesicular body protein 6.
    
 0.714
Stam2
Signal transducing adaptor molecule 2.
   
 
 0.700
Vps4b
Vacuolar protein sorting 4 homolog B.
    
 0.684
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.