STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acbd3acyl-CoA binding domain containing 3. (525 aa)    
Predicted Functional Partners:
Pi4kb
Phosphatidylinositol 4-kinase beta.
    
 
 0.966
Golgb1
Golgi autoantigen, golgin subfamily b, macrogolgin 1.
    
 0.870
ENSMOCP00000013677
annotation not available
    
 0.870
Cttn
Cortactin.
    
 0.786
Tbc1d22a
TBC1 domain family member 22A.
    
 
 0.778
Blzf1
Basic leucine zipper nuclear factor 1.
    
 
 0.760
Sbsn
Suprabasin.
    
 0.733
Spag5
Sperm associated antigen 5.
    
 0.733
Gm32742
Predicted gene, 32742.
    
 0.733
Golga3
Golgin A3.
   
 0.720
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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