STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zmynd10Zinc finger MYND-type containing 10. (440 aa)    
Predicted Functional Partners:
Unc79
Unc-79 homolog.
   
 0.998
Wdr35
WD repeat domain 35.
    
 0.850
Ift122
Intraflagellar transport 122.
   
 0.844
Wdr19
WD repeat domain 19.
    
 0.839
Cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.771
Cacna2d2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
    
 0.765
Rsph1
Radial spoke head 1 homolog.
   
 
 0.758
Ift140
Intraflagellar transport 140.
    
 0.749
ENSMOCP00000011381
annotation not available
    
 0.748
Cacna2d1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
    
 0.739
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.