STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stag1Stromal antigen 1. (1258 aa)    
Predicted Functional Partners:
Smc1a
Structural maintenance of chromosomes 1A.
   
 0.995
Rad21
RAD21 cohesin complex component.
   
 0.993
Smc3
Structural maintenance of chromosomes 3.
   
 0.992
Smc1b
Structural maintenance of chromosomes 1B.
   
 0.987
Nipbl
NIPBL cohesin loading factor.
   
 0.978
Stag2
Stromal antigen 2.
  
0.977
Pds5b
PDS5 cohesin associated factor B.
   
 0.975
Rad21l
RAD21 cohesin complex component like 1.
   
 0.972
Wapl
WAPL cohesin release factor.
   
 0.968
Pds5a
PDS5 cohesin associated factor A.
   
 0.962
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.