STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
3110040N11RikChromosome 22 C15orf40 homolog. (128 aa)    
Predicted Functional Partners:
Cs
Citrate synthase.
    
   0.915
Drg1
Developmentally regulated GTP binding protein 1.
    
   0.915
Pole2
DNA polymerase epsilon 2, accessory subunit.
    
   0.915
Grn
Granulin precursor.
    
   0.915
Slc25a1
Solute carrier family 25 member 1.
    
   0.857
Csnk2a1
Casein kinase 2 alpha 1.
    
   0.857
ENSMOCP00000018084
annotation not available
    
   0.857
Drg2
Developmentally regulated GTP binding protein 2.
    
   0.857
Csnk2a2
Casein kinase 2 alpha 2.
    
   0.857
Rpp21
E3 ubiquitin-protein ligase TRIM39.
   
 
  0.853
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.