STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdk2ap1Cyclin dependent kinase 2 associated protein 1. (87 aa)    
Predicted Functional Partners:
Gatad2b
GATA zinc finger domain containing 2B.
    
 
 0.862
Gatad2a
GATA zinc finger domain containing 2A.
    
 
 0.828
Chd3
Chromodomain helicase DNA binding protein 3.
    
 
 0.775
Chd4
Chromodomain helicase DNA binding protein 4.
    
 
 0.747
Mta3
Metastasis associated 1 family member 3.
    
 
 0.742
Hdac1
Histone deacetylase 1.
   
 
 0.733
ENSMOCP00000016007
annotation not available
   
 
 0.733
Mta2
Metastasis associated 1 family member 2.
    
 
 0.727
ENSMOCP00000007298
annotation not available
   
 
 0.722
Hdac2
Histone deacetylase 2.
   
 
 0.722
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.