STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mdc1Mediator of DNA damage checkpoint 1. (1624 aa)    
Predicted Functional Partners:
ENSMOCP00000006669
annotation not available
    
 0.986
Atm
Ataxia telangiectasia mutated.
   
 0.984
Nbn
Nibrin.
    
 0.970
Kdm6a
Lysine demethylase 6A.
    
 0.967
Kdm6b
Lysine demethylase 6B.
    
 0.964
Slf1
SMC5-SMC6 complex localization factor 1.
   
 0.961
Smc6
Structural maintenance of chromosomes 6.
   
 
 0.954
ENSMOCP00000000521
annotation not available
    
 0.947
Topbp1
DNA topoisomerase II binding protein 1.
   
 
 0.942
Ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.939
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.