STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ptpn13Protein tyrosine phosphatase non-receptor type 13. (2464 aa)    
Predicted Functional Partners:
Apc
APC regulator of WNT signaling pathway.
   
 
 0.940
Rapgef6
Rap guanine nucleotide exchange factor 6.
    
 
 0.919
Rapgef2
Rap guanine nucleotide exchange factor 2.
    
 
 0.874
Plekha2
Pleckstrin homology domain containing A2.
    
 0.869
Apc2
APC regulator of WNT signaling pathway 2.
   
 
 0.830
Wwc1
WW and C2 domain containing 1.
    
 0.808
Fas
Fas cell surface death receptor.
    
 
 0.754
Mapk13
Mitogen-activated protein kinase 13.
    
 0.725
Met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.713
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
 0.713
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.