STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc22a18Solute carrier family 22 member 18. (413 aa)    
Predicted Functional Partners:
Osbpl5
Oxysterol binding protein like 5.
   
  
 0.607
Slc22a14
Solute carrier family 22 member 14.
   
  
 0.599
Phlda2
Pleckstrin homology like domain, family A, member 2.
      
 0.599
ENSMOCP00000023866
annotation not available
   
  
 0.556
Ndn
Necdin, MAGE family member.
      
 0.544
Kcnq1
Potassium voltage-gated channel subfamily Q member 1.
      
 0.541
Cdkn1c
Cyclin dependent kinase inhibitor 1C.
      
 0.521
Slc22a16
Solute carrier family 22 member 16.
   
  
 0.465
ENSMOCP00000006420
annotation not available
    
 
 0.460
Rnf167
Ring finger protein 167.
    
 
 0.460
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.