STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim55Tripartite motif containing 55. (544 aa)    
Predicted Functional Partners:
LOC101978981
Ubiquitin-like.
    
 0.726
ENSMOCP00000002633
annotation not available
   
 
 0.676
ENSMOCP00000020238
annotation not available
   
 
 0.673
Icos
Inducible T cell costimulator.
    
  0.642
Tmem173
Stimulator of interferon response cGAMP interactor 1.
    
  0.628
Kbtbd12
Kelch repeat and BTB domain containing 12.
   
 
 0.602
ENSMOCP00000020359
annotation not available
    
 0.601
Wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.594
Rps27a
Ribosomal protein S27a.
    
  0.593
ENSMOCP00000008122
annotation not available
    
  0.593
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.